PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000125980
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 168aa    MW: 19968.6 Da    PI: 7.0299
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000125980genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.22.9e-1871302128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                    p  f F+P d+++++++L k + +++    + +e ++e d++++ ePw++ ++ +++++++yfF++ +k+   + r +r++ +g+W+++ + + v+
  MDP0000125980   7 PYAFCFQPPDQQIISFFLYKMAVKRQllpPPHDEYVHEEDLFDFkEPWEIWEE-YGGDQDLYFFCELKKT---SLRIHRKIGEGTWSEKEH-ELVY 97 
                    67899***************999998887666678*******9889****744.57799*******9885...679**********98755.7888 PP

            NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++g+ +g kk + +  +r ++  +  W+++ey+l
  MDP0000125980  98 NENGNPIGWKKKFRYE-NRGSD-DHGGWILDEYSL 130
                    88************97.34433.589*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.5E-224155IPR003441NAC domain
PROSITE profilePS5100522.1536158IPR003441NAC domain
PfamPF023652.2E-128130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MAGPLVPYAF CFQPPDQQII SFFLYKMAVK RQLLPPPHDE YVHEEDLFDF KEPWEIWEEY  60
GGDQDLYFFC ELKKTSLRIH RKIGEGTWSE KEHELVYNEN GNPIGWKKKF RYENRGSDDH  120
GGWILDEYSL LVGADGRAEK ASKDRYDIPF VICRLRKNRR SCGKKRNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008349777.11e-124PREDICTED: uncharacterized protein LOC103413062
RefseqXP_008385410.11e-124PREDICTED: uncharacterized protein LOC103447965
TrEMBLM5VHT24e-42M5VHT2_PRUPE; Uncharacterized protein
TrEMBLM5W5X72e-42M5W5X7_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.15e-09NAC family protein